Scripting Life: the science behind ViBRANT
Registration
Associated EDIT meeting
Grande Galerie de l'Evolution, Paris, France
Conference Overview
This two-day conference is the kick-off meeting for ViBRANT – an EU infrastructures project supporting the development of virtual research communities engaged in biodiversity science. Registrants will include taxonomists, computer scientists, ecologists, evolutionary biologists, and representatives of government agencies, in addition to scientists from the 17 ViBRANT partners. Day one will cover the major thematic components and philosophy of the ViBRANT project. Day two consists of a series of lightning talks outlining the partners contributions to ViBRANT’s eight workpackages.
About ViBRANT
Data are one of the primary outputs of biodiversity research. ViBRANT’s goal is to provide a more integrated and effective framework for managing this data on the Web via i) a virtual research environment (Scratchpads) where users can safely store, share and manage their research information; ii) analytical services for users to build identification keys and phylogenetic trees; iii) a publication platform for users to automatically compile biodiversity science manuscripts from their research database; iv) a portal for users to centrally access publicly accessible biodiversity research information and literature; v) training, helping research communities to use these tools and services; and 6) a standards compliant technical architecture that can be sustained by the biodiversity research community. For more information, visit the ViBRANT website (http://vbrant.eu) where you can get involved by starting a Scratchpad, getting training, access data, or helping us to develop the software.
Venue & Directions
The meeting is to be held at the Grande Galerie de l'Evolution, Paris, France and is scheduled to take place after the final EDIT conference that runs between 17-19th January. A list of local hotels and directions to get to the Museum are available from the EDIT conference site. You are strongly advised to register early and book both your hotel and travel as early as possible. This is particularly important if you are planning to attend both meetings.
Registration
A registration desk is situated at the entrance to the lecture theatre and will be staffed during the registration period of 9.00-9.30 on Thursday 20th January and during coffee breaks on the 20th and 21st. All delegates and speakers must report to the registration desks to collect their badges to gain access to the lecture theatre. Speakers MUST deposit their slide presentations as powerpoint or PDF documents with the conference organisers at this time.
Lightning talks
ViBRANT’s lightning talks are short presentations limited to 5 minutes and a maximum of 5 slides. Each partner receiving funds will give a lightening talk covering their contribution to ViBRANT, supplementing the ten-minute workpackage presentations on day two. Presentations should highlight the participants’ objectives, user-base and integration activities. Speakers should focus on the most salient aspects their work and be available to address audience invited questions as part of the ten-minute general discussion scheduled for the end of each workpakage session.
Presentations
The high volume of speakers on day two means that all presentations (WITHOUT EXCEPTION) must be submitted during conference registration. These presentations will be grouped in to a single Powerpoint presentation for each workpackage. Lightening talk speakers during day two are strongly encouraged to use the Powerpoint template below:
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ViBRANT lightning talk template (5 slides per presentation)
This outlines key themes that we expect project participants to cover during their presentation. A time limit of 5 minutes per lightening talk will be strictly enforced so we strongly recommend a maximum of 5 slides per presentation.
Workpackage leaders may also use this template as the basis for their longer (10 munite) presentations but are recommended to include more slides since they have greater scope for variation. Suggested topics for workpackage leaders include an overview of workpackage activities, sustainability, specific risks associated with the workpackage and how workpackage activities can be linked within ViBRANT and the wider landscape of European and international biodiversity informatics projects.
Each workpackage session concludes with a 10 minute question and answer session to facilitate a dialoge between the workpackage participants and the remaining audience. Workpackage leaders might like to prepare discussion points relavent to their workpackage in advance of their session.
Catering and refreshment
Tea and coffee will be available during mid-morning and mid-afternoon refreshment breaks in the cafe above the Auditorium. The lunch will be in the Museum Canteen.
Funding
There is no conference registration fee. Partners in ViBRANT have been allocated funding for this meeting directly. No further funding is available from the organisers.
Language
The official conference language is English. There will be no simultaneous translation.
Internet Access
Internet access at the Grande Galerie de l'Evolution will be available at the podium for speakers and we hope to have WiF access for the delegates.
FINAL PROGRAMME
Thursday, 20 January 2011 |
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9.00 |
Conference registration including powerpoint / PDF slide submission |
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9.30 |
Welcome and logistics |
Dave Roberts, Project manager |
9.40 |
ViBRANT Project Overview |
Vince Smith, ViBRANT Coordinator |
10.10 |
The Path to Enlightened Solutions for Biodiversity's Dark Data |
Bryan Heidorn, Director of the School of Information Resources and Library Science at University of Arizona |
11.00 |
COFFEE BREAK |
Cafe above the Auditorium |
11.30 |
Biodiversity informatics: why aren't we there yet? |
Rod Page, University of Glasgow |
12.20 |
Lessons learnt from EDIT - linking taxonomy and conservation |
Christoph Häuser, Museum für Naturkunde Berlin |
12.50 |
LUNCH BREAK |
Museum Canteen |
14.00 |
Biodiversity Literature for the 21st Century |
Donat Agosti, ViBRANT Strategic Board member, Plazi President and American Museum of Natural History, New York. |
14.30 |
Biodiversity Heritage Library: Process & Progress |
Phil Cryer, Biodiversity Heritage Library |
15.00 |
Sociological tips for successful infrastructures |
Christine Hine, University of Surrey, UK. |
15.30 |
COFFEE BREAK |
Cafe above the Auditorium |
16.00 |
Participation, Publication, Persistence & Platforms |
Gregor Hagedorn, ViBRANT Strategic Board member & Scientist at the Julius Kühn Institute |
16.30 |
Setting the Scene for ViBRANT – Strategy, Philosophy and Communication |
Vince Smith, ViBRANT Coordinator and Dave Roberts, Project manager |
17.00 |
END OF FIRST DAY |
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Friday, 21 January 2011 |
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9.00 |
An introduction to lightning talks – setting the scene for the day |
Vince Smith |
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ViBRANT PROJECT MANAGEMENT | |
9:10 |
WP1: Overview (Management, record keeping, auditing, reporting, accounting, money, timesheets, delivering deliverables and logistics) |
Gemma Maldar |
9:20 |
ViBRANT management arrangements |
Dave Roberts |
9:25 |
ViBRANT Strategic board |
Vince Smith |
9:30 |
WP1 general discussion and questions |
Facilitated by Gemma Maldar |
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ViBRANT NETWORKING ACTIVITES |
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9:40 |
WP3 Overview (Training and Sociology) |
Thierry Backeljau, WP3 Leader |
9:50 |
Training Programme |
Isabella Van de Velde |
9:55 |
NHM training and support integration |
Irina Brake |
10:00 |
Users communities and user requirements: moving (biodiversity information) from desk to desktop |
Peter van den Besselaar and / or Daphne Duin |
10:05 |
Identification tools and user engagement in KeyToNature |
Pier Lugi Nimis |
10:10 |
WP3 general discussion and questions |
Facilitated by Thierry Backeljau |
10:20 |
COFFEE BREAK |
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10:50 |
WP4 Overview (Standards) |
Olaf Banki, WP4 leader |
11:00 |
GBIF Controlled Vocabularies |
Dave Remsen |
11:05 |
Facilitating Vocabulary Building |
Gregor Hagedorn |
11:10 |
Linking standards |
Walter Berendsohn |
11:15 |
WP4 general discussion and questions |
Facilitated by Olaf Banki |
11:25 |
WP8 Overview (Mobalisation) |
Christos Arvanitidis, WP8 leader |
11:35 |
GBIF nodes and data enhancement activities |
Dave Remsen |
11:40 |
ViBRANT Data visualisation (Including mobile apps): |
Javier de la Torre |
11:45 |
Terrestrial data logging |
Alexander Kroupa |
11:50 |
Citizen science activities |
Christos Arvanitidis |
11:55 |
WP8 general discussion and questions |
Facilitated by Christos Arvanitidis |
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ViBRANT SERVICE ACTIVITES |
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12:05 |
WP5 Overview (Data services) |
Neil Caithness, WP5 leader |
12:15 |
Distributed phylogenetic services |
Milo Thurston |
12:20 |
Identification keys |
Régine Vignes-Lebbe |
12:25 |
Ontologies for description, classification and identification processes |
Noël Conruyt |
12:30 |
Descriptive data supporting keys – SDD |
Gregor Hagedorn |
12:35 |
Mobile phone apps monitoring biodiversity |
Javier de la Torre |
12:40 |
Biodiversity indices |
Javier de la Torre |
12:45 |
WP5 general discussion and questions |
Facilitated by Neil Caithness |
12:50 |
LUNCH |
Museum Canteen |
13:50 |
WP6 Overview: From prototypes to industry standards: Markup, semantic enhancements and automated dissemination of content from the viewpoint of a biodiversity publisher |
Lyubo Penev, WP6 leader |
14:00 |
Gathering data for publications |
Ben Scott |
14:05 |
XML-based editorial workflow, or how to extract more value from the same source? |
Teodor Georgiev |
14:10 |
WP6 general discussion and questions |
Facilitated by Lyubo Penev |
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ViBRANT RESEARCH ACTIVITIES |
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14:20 |
WP7 Overview (Biodiversity literature) |
David Morse, WP7 leader |
14:30 |
Content Markup / Plazi |
Guido Sautter |
14:35 |
INOTAXA markup and its relations to ViBRANT |
Chris Lyal |
14:40 |
XML markup in prospective publishing, or how to be at the same time innovative and cost efficient? |
Teodor Georgiev |
14:45 |
Semantic data mining of literature |
Dave King |
14:50 |
WP7 general discussion and questions |
Facilitated by David Morse |
15:00 |
COFFEE BREAK |
Cafe above the Auditorium |
15:30 |
WP2 Overview (Technical architecture) |
Simon Rycroft, WP2 leader |
15:40 |
Search portal |
Walter Berendsohn |
15:45 |
Scratchpad module architecture and integration |
Simon Rycroft |
15:50 |
WP2 general discussion and questions |
Facilitated by Simon Rycroft |
16:00 |
Discussion on workpackage activity integration through the Scratchpads |
Facilitated by Dave Roberts |
16:30 |
Nothing can possbily go wrong – Risk Analysis discussion |
Facilitated by Gemma Maldar & Vince Smith |
17:00 |
MEETING CLOSE |
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Attachment | Size |
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ViBRANT-LighteningTalk-Template.ppt | 685.5 KB |
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